Pages Menu

Posted on Dec 17, 2013 in News | 1 comment

Distributed computing: allowing you to save the world while you sleep

dextrous
Computer time has long been considered an essential resource in
conducting in silico simulations, either replacing or complementing
traditional experiments. So what’s a researcher to do when
supercomputer time costs millions of dollars and the supercomputers
themselves cost billions? Sadly, not everybody has a spare computing behemoth
lying around in their back yard to loan out to starving researchers.

In recent years, thanks to the power of the Internet, the idea of
harvesting unused CPU cycles from volunteer computers has become not
just a possibility, but a practicality. Most computers, whether at
home or at work, are not utilized to their full capacity. Web browsing
and reading email hardly count as taxing duties for today’s state of
the art computers with processor power several orders of magnitude
greater than what was available 30 years ago.

Distributed computing has been around since 1997, when an early
attempt harnessed volunteer computers to crack an encryption key
similar to trying every concievable combination on a number lock,
by by trying every possible combination. Ordinarily, this would be impossible for a single computer to attempt within a human lifetime, but with the huge amount of
processing time available, the search was hastened by several orders of magnitude, making it a feasible prospect.

Today, this approach has been applied to many diverse problems in
different scientific fields, ranging from mathematics, astronomy,
physics, and of course, life sciences. Two examples include the IBM
World Community Grid, involved in numerous projects including research
into a potential cure for cancer and anti-AIDS drugs, and the
Rosetta@Home project, analyzing protein structures.

These projects are managed by front-end software called BOINC, the
Berkeley Open Infrastructure for Networked Computing. Problems too big
for a single computer to tackle, such as searching vast amounts of
data for cancer markers or biologically active molecules, are divided
up into manageable pieces and automatically sent out to the clients
participating in the project. Results, once processed, are
automatically sent back to the server for aggregation. To give one an
idea of how much processor time is available, the World Community Grid
tracks a statistic called Run Time Per Calendar Day. This is
equivalent to the number of days of running a single computer,
achieved in 24 hours of real time. One project is averaging an incredible 63 years
worth of computer time contributed to the project – every 24 hours!

Today’s Tablet – How it Stacks Up
Simultaneously, since 1997, the mobile phone has evolved from a
straightforward voice communication device, to a powerful handheld
computer in its own right. Mobile CPUs have grown from primitive
integrated circuits to full blown multi-core CPUs, such as the NVidia
Tegra 3-30L found in the Google Nexus 7 (2012) Android tablet. In
2012, BOINC also started including support for Android-based mobile
clients, in addition to its traditional usage of desktop and laptop
CPUs, as mobile clients finally gained enough processor power, storage
and RAM to tackle compute-intensive tasks.

While cross-platform comparisons are often difficult, due to a myriad
of factors such as different architectures, programming languages,
operating systems and so on, MIPS (Millions of Instructions Per
Second) serves as a very rough benchmark to provide a relative
comparison between platforms and generations.

Relative performance

NVidia Tegra 3-30L CPU in a Nexus 7 2012 tablet, 5W power consumption
Approximately 10500 MIPS

MacBook Air 2013
Intel core i5-4250U, 15W power consumption (CPU alone)
~47000 MIPS

Desktop with quad-core Intel i5-4770K, 84W power consumption
125000 MIPS

A rough estimate is that a Nexus 7 (2012 edition) Android tablet would
provide nearly a quarter of the CPU power available to a contemporary
MacBook Air (2013) user. For a portable, handheld device consuming a
mere 5 watts, capable of running all day on a much smaller battery,
this is quite an achievement. While still remarkably power efficient
(indeed it achieves higher MIPS per watt), the Macbook needs to
consume at least 3 times the power to deliver the amount of computing
power it does.

Comparisons with a desktop CPU make the Android appear even more
efficient. While the Intel i5-4770K quad-core CPU is nearly 11 times
more powerful, it also consumes 17 times more power in order to
provide this performance, and certainly is not designed for
portability.

Consider this, in 1999 an Intel Pentium III (600Mhz) produced
approximately 2K MIPS. Even at that time, it was suitable, indeed
highly regarded for early distributed computing efforts.

No Free Lunch

Of course, there’s no such thing as a free lunch. Running
CPU-intensive applications generates heat and drains power, which is a
concern especially for portable users. To this end, the BOINC client
has been intelilgently engineered to start running only when the
Android device is charged >90%, and only communicates with its servers
on WiFi. While this seems to limit the use of the client, a tradeoff
is made between inconveniencing the volunteer user donating their CPU
time, and the time available for processing.

As it is, this combination of events happens when you leave your
tablet or phone overnight to recharge. Simply install the BOINC client
from the Google Play store, select a project you’d like to participate
in, adjust the parameters (if necessary) and leave your mobile device
overnight to charge. Once fully charged, it will start processing, and
stop when you take it off the charger the next day.

Unfortunately, no client for IOS devices is available today, but
hopefully there may be some day in the future.

Saving the world while you sleep? Yup, it’s possible. Every computer
counts. Try it today.

Further Reading

If you would like to read more, please see the BOINC Android FAQ.
http://boinc.berkeley.edu/wiki/Android_FAQ

The client can also be downloaded from the Google Play store here:
https://play.google.com/store/apps/details?id=edu.berkeley.boinc&hl=en

News Article by Kevin Lam

Read More

Posted on Dec 1, 2013 in News | 0 comments

Digging deep for digital digits

Crowd-sourcing has become quite popular method of raising capital for up and coming startups and the mHealth sector is no stranger to the concept, with a project recently having reached funds on Indiegogo for Dextrus: the open source robotic prosthetic hand.

The campaign reached its $64000 goal in just over a month with sponsors donating around an additional $8000 in excess.

The company has pledged to use the funds to create a viable prosthetic arm that can be sold for under $1000. It hopes to publish the designs of the prosthetic as an open-source project with no patents so that other companies can develop on it and further improve on the concept. Their focus also extends to the developing world where import taxes impose a significant cost burden on such devices.

Dextrus is currently already being used in its prototype form by Chef Liam Corbett, who lost his right arm as a complication of meningitis. Some of you may have already sampled food prepared by robot hands.

Source: http://www.indiegogo.com/projects/the-open-hand-project-a-low-cost-robotic-hand

dextrous

Read More

Posted on Oct 29, 2013 in News | 0 comments

Earbuds to measure racing hearts

Your run-of-the-mill earphones could be the latest innovation in mobile health technology. In the past, music has gotten pulses racing, now with health, it seems we can measure how much by. The Kaiteki Institute in Japan and Bifrostec has been developing technology to turn earphones into pulse rate monitors via special software algorithms.

This technology works by utilising the pressure change in the enclosed ear caused by pulsating arteries when earphones are worn. This pressure change occurs at roughly 1Hz and can be detected by earbuds functioning as microphones. Since earphones do not always make a completely enclosed space and measurements can be influenced by ambient noise, the companies have created unique signal processing technologies to combat these issues.

Given the rise of the “Quantified Self” movement, many fitness tracking devices and apps have hit the market. One possible utilisation of this technology could be a simple pulse tracker for those who prefer to run while listening to music with one less gadget to carry. The companies are also developing “at home” medical vital sign monitoring equipment for the future based on similar principles.

Source:
http://www.bifrostec.co.jp/english/index.html
http://www.kaiteki-institute.com/research/activities/2013/20130729.html
http://techon.nikkeibp.co.jp/english/NEWS_EN/20131025/311441/

heartrate

Read More

Posted on Oct 15, 2013 in News | 0 comments

Sotera clears FDA, Wireless BP measurements on the way

Sotera Wireless recently announced that one of the company’s key products, the continuous non-invasive blood pressure monitor (cNIBP), has cleared the FDA regulatory process. This means that continuous, beat-to-beat, cuff and invasive catheter less blood pressure measurements are one step closer to hitting hospital floors.

This technology is part of the ViSi Mobile patient monitoring system that is being developed by the San Diego based company. Once released, the wrist worn device will allow for the continuous measurement of all core patient vital signs including blood pressure, heart rate, ECG, oxygen saturation, respiratory rate and even skin temperature. Sotera claims that the accuracy of the devices can match those offered by the systems used in Intensive Care Units, citing studies that show blood pressure accuracy is claimed to be within a range of 5mmHg as compared to invasive arterial line monitoring.

Wireless monitoring technology could prove to be revolutionary in healthcare as it has the potential to dramatically reduce the workload on healthcare staff, where routine measurements of vital signs take considerable time. The wireless nature of the system would also allow computer/mobile based access to the vital signs, alleviating the need to “hunt for the patient charts” during the daily medical ward round.

Dr Bob Murad, Co-founder of Sotera, said ““Hospitals are now safer, gentler places. With continuous monitoring of all vital signs, now including cuffless and continuous blood pressure, hospitals can be confident that deterioration in a patient’s condition will not go unnoticed for hours at a time between periods of observation. No longer will healing patients have to endure sleep interruptions in order to document that all is well.”

Press Release: http://www.soterawireless.com/wp-content/uploads/2013/10/new_cNIBP_clearance_PR010-100913Final.pdf

sotera header

Read More

Posted on Oct 11, 2013 in News | 0 comments

AirStrip enables a consistent cross-platform mHealth experience

The stratospheric rise of smartphones has also brought with it several dominant platforms all vying for users, each with it’s unique features, but offering essentially the same core functionality. Many apps and services have now standardised their apps or features across multiple platforms, including AirStrip, which became the first mHealth company to support the yet unreleased Microsoft Windows 8.1 OS.

“Mobility is no longer defined as just smartphones and tablets. This release of AirStrip ONE Cardiology for Windows 8.1 supports our vision of developing a consistent and seamless user experience for mobile clinical professionals, regardless of form factor,” said Alan Portela, CEO of AirStrip in a company press release. With much of the existing hospital IT infrastructure firmly entrenched in the Windows platform, this move would allow for better integration and a consistent experience for clinicians. He stated that “enabling clinicians to access vital data from across the care continuum in a single unified format will result in an increase in mobile utilisation, helping to drive transformation toward higher quality, more efficient care that mitigates the increasing pressures on a fast-changing healthcare system.”

Microsoft has welcomed the development and has assured a seamless experience across all form factors of devices that utilise the OS including Microsofts own Surface tablets. One of the early Apple ads fired the imagination of clinicians when it showed an ECG rhythm strip being recorded on an iPad. With this development, the Surface may also become ubiquitous in the mHealth field once AirStrip clears the necessary FDA regulations.

Press Release: http://www.airstrip.com/sites/default/files/Cardiology-for-Windows-News-Release-final-9-30.pdf

airstrip windows

Read More